Package: palaeoSig 2.1-2

palaeoSig: Significance Tests for Palaeoenvironmental Reconstructions

Several tests of quantitative palaeoenvironmental reconstructions from microfossil assemblages, including the null model tests of the statistically significant of reconstructions developed by Telford and Birks (2011) <doi:10.1016/j.quascirev.2011.03.002>, and tests of the effect of spatial autocorrelation on transfer function model performance using methods from Telford and Birks (2009) <doi:10.1016/j.quascirev.2008.12.020> and Trachsel and Telford (2016) <doi:10.5194/cp-12-1215-2016>. Age-depth models with generalized mixed-effect regression from Heegaard et al (2005) <doi:10.1191/0959683605hl836rr> are also included.

Authors:Richard Telford [aut, cre, cph], Mathias Trachsel [ctb]

palaeoSig_2.1-2.tar.gz
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palaeoSig_2.1-2.tgz(r-4.4-any)palaeoSig_2.1-2.tgz(r-4.3-any)
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palaeoSig.pdf |palaeoSig.html
palaeoSig/json (API)
NEWS

# Install 'palaeoSig' in R:
install.packages('palaeoSig', repos = c('https://richardjtelford.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/richardjtelford/palaeosig/issues

Datasets:
  • Atlantic - Atlantic core-top foram assemblages
  • STOR - Storsandsvatnet
  • arctic.env - Arctic Pollen and associated environmental data
  • arctic.pollen - Arctic Pollen and associated environmental data

On CRAN:

5.45 score 3 stars 31 scripts 220 downloads 3 mentions 15 exports 45 dependencies

Last updated 2 years agofrom:bfc75ef861. Checks:OK: 1 WARNING: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 25 2024
R-4.5-winWARNINGOct 25 2024
R-4.5-linuxWARNINGOct 25 2024
R-4.4-winWARNINGOct 25 2024
R-4.4-macWARNINGOct 25 2024
R-4.3-winWARNINGOct 25 2024
R-4.3-macWARNINGOct 25 2024

Exports:abundancesagelmeanamorphcentipede_plotcor.mat.funcoverage_plotHill.N2.corejointsigmake.envmake.setmulti.matobs.corrandomTFrnespecies

Dependencies:assertrcliclustercolorspacecpp11dplyrfansifarverforcatsgenericsggplot2ggrepelgluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepermutepillarpkgconfigpurrrR6RColorBrewerRcppriojarlangscalesstringistringrTeachingDemostibbletidyrtidyselectutf8vctrsveganviridisLitewithr

H-block cross-validation

Rendered fromh-block-crossvalidation.Rmdusingknitr::rmarkdownon Oct 25 2024.

Last update: 2023-02-23
Started: 2019-06-20

randomTF on spatially structured environments

Rendered fromrandomTF-spatial.Rmdusingknitr::rmarkdownon Oct 25 2024.

Last update: 2023-02-23
Started: 2023-02-12